Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac6Q9Z2V5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Hdac6Q9Z2V5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Gm8655-201ENSMUST00000221159 852 ntBASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hdac6Q9Z2V5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac6Q9Z2V5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hdac6Q9Z2V5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gm9172-201ENSMUST00000212092 954 ntBASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac6Q9Z2V5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac6Q9Z2V5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac6Q9Z2V5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.7■□□□□ 0.91
Hdac6Q9Z2V5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms