Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ggps1Q9WTN0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ggps1Q9WTN0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Gm6443-201ENSMUST00000203599 874 ntBASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ggps1Q9WTN0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Rps4l-201ENSMUST00000071745 943 ntBASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ggps1Q9WTN0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ggps1Q9WTN0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Gm18733-201ENSMUST00000173950 856 ntBASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ggps1Q9WTN0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 AW822252-206ENSMUST00000208904 237 ntBASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ggps1Q9WTN0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms