Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 AA414768-201ENSMUST00000121924 1257 ntBASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tubd1Q9R1K7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Tubd1Q9R1K7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Tubd1Q9R1K7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Gm29518-201ENSMUST00000190858 372 ntBASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tubd1Q9R1K7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tubd1Q9R1K7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Gm6623-201ENSMUST00000173570 544 ntBASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubd1Q9R1K7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubd1Q9R1K7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubd1Q9R1K7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms