Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim44Q9QXA7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim44Q9QXA7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Gm29791-202ENSMUST00000207888 369 ntBASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim44Q9QXA7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim44Q9QXA7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Prob1-201ENSMUST00000097619 3021 ntBASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trim44Q9QXA7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms