Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rbfox1Q9JJ43 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rbfox1Q9JJ43 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Gm12085-201ENSMUST00000119263 940 ntBASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Gm20760-201ENSMUST00000179197 648 ntBASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Odf3b-204ENSMUST00000227834 930 ntBASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rbfox1Q9JJ43 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbfox1Q9JJ43 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms