Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Gm10849-201ENSMUST00000100397 618 ntBASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Gm8495-201ENSMUST00000188740 694 ntBASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube4bQ9ES00 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ube4bQ9ES00 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Gm43072-201ENSMUST00000200283 1671 ntBASIC16■□□□□ 0.15
Ube4bQ9ES00 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ube4bQ9ES00 Gm22325-201ENSMUST00000158904 308 ntBASIC16■□□□□ 0.15
Ube4bQ9ES00 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ube4bQ9ES00 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16■□□□□ 0.15
Ube4bQ9ES00 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube4bQ9ES00 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.99■□□□□ 0.15
Ube4bQ9ES00 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ube4bQ9ES00 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4bQ9ES00 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms