Protein–RNA interactions for Protein: Q9DB90

Smg9, Protein SMG9, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg9Q9DB90 Gm13312-201ENSMUST00000119631 718 ntBASIC17.11■□□□□ 0.33
Smg9Q9DB90 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Gm44487-201ENSMUST00000205145 325 ntBASIC17.11■□□□□ 0.33
Smg9Q9DB90 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.11■□□□□ 0.33
Smg9Q9DB90 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg9Q9DB90 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.11■□□□□ 0.33
Smg9Q9DB90 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.1■□□□□ 0.33
Smg9Q9DB90 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg9Q9DB90 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Rprl3-201ENSMUST00000157400 290 ntBASIC17.09■□□□□ 0.33
Smg9Q9DB90 Gm18733-201ENSMUST00000173950 856 ntBASIC17.09■□□□□ 0.33
Smg9Q9DB90 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.09■□□□□ 0.33
Smg9Q9DB90 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg9Q9DB90 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Smg9Q9DB90 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg9Q9DB90 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Smg9Q9DB90 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg9Q9DB90 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg9Q9DB90 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.07■□□□□ 0.32
Smg9Q9DB90 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smg9Q9DB90 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Gm15165-201ENSMUST00000118140 502 ntBASIC17.07■□□□□ 0.32
Smg9Q9DB90 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.07■□□□□ 0.32
Smg9Q9DB90 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg9Q9DB90 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smg9Q9DB90 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smg9Q9DB90 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms