Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smco2Q9DA21 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Gm17807-201ENSMUST00000186869 298 ntBASIC18.68■□□□□ 0.58
Smco2Q9DA21 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco2Q9DA21 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Gm13186-201ENSMUST00000118031 316 ntBASIC18.67■□□□□ 0.58
Smco2Q9DA21 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco2Q9DA21 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Gm11336-201ENSMUST00000118168 334 ntBASIC18.66■□□□□ 0.58
Smco2Q9DA21 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Gm27742-201ENSMUST00000184667 60 ntBASIC18.66■□□□□ 0.58
Smco2Q9DA21 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.66■□□□□ 0.58
Smco2Q9DA21 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.66■□□□□ 0.58
Smco2Q9DA21 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco2Q9DA21 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Gm27741-201ENSMUST00000185060 237 ntBASIC18.65■□□□□ 0.58
Smco2Q9DA21 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Smco2Q9DA21 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smco2Q9DA21 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smco2Q9DA21 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Gm28033-201ENSMUST00000184224 96 ntBASIC18.64■□□□□ 0.57
Smco2Q9DA21 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.64■□□□□ 0.57
Smco2Q9DA21 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smco2Q9DA21 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco2Q9DA21 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms