Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Mir770-201ENSMUST00000103252 94 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm11950-201ENSMUST00000121615 838 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm6623-201ENSMUST00000173570 544 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm29518-201ENSMUST00000190858 372 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm29707-201ENSMUST00000196325 491 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gm17808-201ENSMUST00000200859 894 ntBASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssmem1Q9D9Y8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ssmem1Q9D9Y8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssmem1Q9D9Y8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssmem1Q9D9Y8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gm18421-201ENSMUST00000204122 625 ntBASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms