Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
U2af1Q9D883 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
U2af1Q9D883 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.79■■□□□ 1.08
U2af1Q9D883 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.79■■□□□ 1.08
U2af1Q9D883 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.79■■□□□ 1.08
U2af1Q9D883 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
U2af1Q9D883 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
U2af1Q9D883 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
U2af1Q9D883 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
U2af1Q9D883 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
U2af1Q9D883 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
U2af1Q9D883 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.77■■□□□ 1.08
U2af1Q9D883 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.77■■□□□ 1.08
U2af1Q9D883 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
U2af1Q9D883 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
U2af1Q9D883 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Gm17807-201ENSMUST00000186869 298 ntBASIC21.77■■□□□ 1.08
U2af1Q9D883 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.77■■□□□ 1.08
U2af1Q9D883 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
U2af1Q9D883 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
U2af1Q9D883 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.77■■□□□ 1.07
U2af1Q9D883 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.76■■□□□ 1.07
U2af1Q9D883 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
U2af1Q9D883 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.76■■□□□ 1.07
U2af1Q9D883 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
U2af1Q9D883 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Gm9103-201ENSMUST00000119371 405 ntBASIC21.76■■□□□ 1.07
U2af1Q9D883 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
U2af1Q9D883 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.76■■□□□ 1.07
U2af1Q9D883 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2af1Q9D883 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
U2af1Q9D883 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.75■■□□□ 1.07
U2af1Q9D883 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
U2af1Q9D883 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.75■■□□□ 1.07
U2af1Q9D883 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2af1Q9D883 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms