Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rita1Q9D1H0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gm9103-201ENSMUST00000119371 405 ntBASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gm17807-201ENSMUST00000186869 298 ntBASIC15.25■□□□□ 0.03
Rita1Q9D1H0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.25■□□□□ 0.03
Rita1Q9D1H0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rita1Q9D1H0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rita1Q9D1H0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Mir3081-201ENSMUST00000175305 84 ntBASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rita1Q9D1H0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Gm28033-201ENSMUST00000184224 96 ntBASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rita1Q9D1H0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms