Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 AA414768-201ENSMUST00000121924 1257 ntBASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Gm17661-201ENSMUST00000170317 270 ntBASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sft2d3Q9CSV6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Mir8112-201ENSMUST00000184382 131 ntBASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sft2d3Q9CSV6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sft2d3Q9CSV6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms