Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Gm7729-201ENSMUST00000050143 801 ntBASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msantd3Q9CR78 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Gm13312-201ENSMUST00000119631 718 ntBASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Phf7-203ENSMUST00000226565 1971 ntBASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msantd3Q9CR78 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Gm44450-201ENSMUST00000199528 114 ntBASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msantd3Q9CR78 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Gm18733-201ENSMUST00000173950 856 ntBASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msantd3Q9CR78 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms