Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf8Q99PV0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Prpf8Q99PV0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Gm44430-201ENSMUST00000203376 995 ntBASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf8Q99PV0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Gm27867-201ENSMUST00000184778 125 ntBASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf8Q99PV0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf8Q99PV0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms