Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim16Q99PP9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trim16Q99PP9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim16Q99PP9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim16Q99PP9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim16Q99PP9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.23■□□□□ 0.19
Trim16Q99PP9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.23■□□□□ 0.19
Trim16Q99PP9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim16Q99PP9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.23■□□□□ 0.19
Trim16Q99PP9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trim16Q99PP9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.22■□□□□ 0.19
Trim16Q99PP9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.22■□□□□ 0.19
Trim16Q99PP9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.22■□□□□ 0.19
Trim16Q99PP9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim16Q99PP9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim16Q99PP9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.21■□□□□ 0.19
Trim16Q99PP9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim16Q99PP9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms