Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.45■□□□□ 0.22
Trim33Q99PP7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim33Q99PP7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.43■□□□□ 0.22
Trim33Q99PP7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim33Q99PP7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.42■□□□□ 0.22
Trim33Q99PP7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.42■□□□□ 0.22
Trim33Q99PP7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.42■□□□□ 0.22
Trim33Q99PP7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.42■□□□□ 0.22
Trim33Q99PP7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim33Q99PP7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim33Q99PP7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.41■□□□□ 0.22
Trim33Q99PP7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.41■□□□□ 0.22
Trim33Q99PP7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim33Q99PP7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms