Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Gm11764-201ENSMUST00000120221 623 ntBASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Mir6977-201ENSMUST00000184960 64 ntBASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh23Q99PF4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.85■□□□□ 0.29
Cdh23Q99PF4 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.85■□□□□ 0.29
Cdh23Q99PF4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdh23Q99PF4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Gm17968-201ENSMUST00000194902 784 ntBASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh23Q99PF4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.83■□□□□ 0.29
Cdh23Q99PF4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh23Q99PF4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Gm12428-201ENSMUST00000119844 727 ntBASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms