Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf2ird2Q99NI3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf2ird2Q99NI3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Gtf2ird2Q99NI3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Gm44450-201ENSMUST00000199528 114 ntBASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gtf2ird2Q99NI3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Gm29707-201ENSMUST00000196325 491 ntBASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gtf2ird2Q99NI3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gtf2ird2Q99NI3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gtf2ird2Q99NI3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms