Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha8Q91Y12 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha8Q91Y12 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha8Q91Y12 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha8Q91Y12 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha8Q91Y12 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha8Q91Y12 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha8Q91Y12 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha8Q91Y12 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Gm13559-201ENSMUST00000120476 863 ntBASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Gm16061-201ENSMUST00000122167 857 ntBASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Gm13474-201ENSMUST00000122466 815 ntBASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha8Q91Y12 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha8Q91Y12 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdha8Q91Y12 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdha8Q91Y12 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdha8Q91Y12 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms