Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.21■□□□□ 0.19
Pcdhb8Q91XZ2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb8Q91XZ2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb8Q91XZ2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb8Q91XZ2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb8Q91XZ2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb8Q91XZ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb8Q91XZ2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.18■□□□□ 0.18
Pcdhb8Q91XZ2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb8Q91XZ2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms