Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhgb4Q91XX6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Gm13436-201ENSMUST00000120418 567 ntBASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb4Q91XX6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Phf7-203ENSMUST00000226565 1971 ntBASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb4Q91XX6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb4Q91XX6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb4Q91XX6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms