Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhb11Q91UZ8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Gm11336-201ENSMUST00000118168 334 ntBASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb11Q91UZ8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb11Q91UZ8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Gm37722-201ENSMUST00000193757 208 ntBASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb11Q91UZ8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb11Q91UZ8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb11Q91UZ8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb11Q91UZ8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Pcdhb11Q91UZ8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb11Q91UZ8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb11Q91UZ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms