Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Foxe1Q8R2I0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxe1Q8R2I0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxe1Q8R2I0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Gm14701-201ENSMUST00000117156 348 ntBASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxe1Q8R2I0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Gm12497-201ENSMUST00000138778 237 ntBASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxe1Q8R2I0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxe1Q8R2I0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.08■□□□□ 0.32
Foxe1Q8R2I0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms