Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vopp1Q8R1C3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Gm13418-201ENSMUST00000119097 944 ntBASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Gm11780-201ENSMUST00000136880 516 ntBASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Gm18733-201ENSMUST00000173950 856 ntBASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Mir5131-201ENSMUST00000175426 93 ntBASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vopp1Q8R1C3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm25990-201ENSMUST00000102440 86 ntBASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm18195-201ENSMUST00000207604 706 ntBASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm10060-201ENSMUST00000212002 111 ntBASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vopp1Q8R1C3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Gm25406-201ENSMUST00000157599 105 ntBASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Mir6404-201ENSMUST00000183699 94 ntBASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vopp1Q8R1C3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vopp1Q8R1C3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Vopp1Q8R1C3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vopp1Q8R1C3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Vopp1Q8R1C3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Gm4459-201ENSMUST00000118750 468 ntBASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vopp1Q8R1C3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Gm1401-201ENSMUST00000122048 772 ntBASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms