Protein–RNA interactions for Protein: Q8N7N6

Traf3ip2, TRAF3-interacting protein 2, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip2Q8N7N6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf3ip2Q8N7N6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Traf3ip2Q8N7N6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Gm12895-201ENSMUST00000122214 226 ntBASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf3ip2Q8N7N6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf3ip2Q8N7N6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Rprl3-201ENSMUST00000157400 290 ntBASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf3ip2Q8N7N6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Birc2-201ENSMUST00000054878 378 ntBASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf3ip2Q8N7N6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf3ip2Q8N7N6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf3ip2Q8N7N6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms