Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn1Q8K445 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn1Q8K445 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn1Q8K445 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clrn1Q8K445 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.66■□□□□ 0.1
Clrn1Q8K445 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clrn1Q8K445 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.65■□□□□ 0.1
Clrn1Q8K445 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Actl10-202ENSMUST00000226583 1501 ntBASIC15.65■□□□□ 0.1
Clrn1Q8K445 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.65■□□□□ 0.1
Clrn1Q8K445 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Gm10566-201ENSMUST00000086739 996 ntBASIC15.65■□□□□ 0.1
Clrn1Q8K445 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clrn1Q8K445 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Phf7-203ENSMUST00000226565 1971 ntBASIC15.64■□□□□ 0.09
Clrn1Q8K445 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Gm13186-201ENSMUST00000118031 316 ntBASIC15.64■□□□□ 0.09
Clrn1Q8K445 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Mir1668-201ENSMUST00000184114 107 ntBASIC15.64■□□□□ 0.09
Clrn1Q8K445 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Clrn1Q8K445 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.63■□□□□ 0.09
Clrn1Q8K445 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms