Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Odf3b-204ENSMUST00000227834 930 ntBASIC14.8□□□□□ -0.04
ShfQ8CG80 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gm20760-201ENSMUST00000179197 648 ntBASIC14.79□□□□□ -0.04
ShfQ8CG80 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.79□□□□□ -0.04
ShfQ8CG80 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.79□□□□□ -0.04
ShfQ8CG80 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ShfQ8CG80 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
ShfQ8CG80 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.78□□□□□ -0.04
ShfQ8CG80 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.78□□□□□ -0.04
ShfQ8CG80 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.78□□□□□ -0.04
ShfQ8CG80 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.78□□□□□ -0.04
ShfQ8CG80 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.78□□□□□ -0.04
ShfQ8CG80 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ShfQ8CG80 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.77□□□□□ -0.04
ShfQ8CG80 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.77□□□□□ -0.04
ShfQ8CG80 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
ShfQ8CG80 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Actl10-202ENSMUST00000226583 1501 ntBASIC14.77□□□□□ -0.04
ShfQ8CG80 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ShfQ8CG80 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ShfQ8CG80 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.77□□□□□ -0.05
ShfQ8CG80 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.77□□□□□ -0.05
ShfQ8CG80 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ShfQ8CG80 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ShfQ8CG80 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.76□□□□□ -0.05
ShfQ8CG80 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ShfQ8CG80 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms