Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Rps4l-201ENSMUST00000071745 943 ntBASIC16.15■□□□□ 0.18
Rab43Q8CG50 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.15■□□□□ 0.18
Rab43Q8CG50 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rab43Q8CG50 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Rab43Q8CG50 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab43Q8CG50 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.13■□□□□ 0.17
Rab43Q8CG50 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.13■□□□□ 0.17
Rab43Q8CG50 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Gm15165-201ENSMUST00000118140 502 ntBASIC16.12■□□□□ 0.17
Rab43Q8CG50 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.12■□□□□ 0.17
Rab43Q8CG50 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.12■□□□□ 0.17
Rab43Q8CG50 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Gm44454-201ENSMUST00000198541 138 ntBASIC16.12■□□□□ 0.17
Rab43Q8CG50 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab43Q8CG50 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.11■□□□□ 0.17
Rab43Q8CG50 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms