Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb7Q8CDY9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdhb7Q8CDY9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb7Q8CDY9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb7Q8CDY9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb7Q8CDY9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb7Q8CDY9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb7Q8CDY9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms