Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rsph6aQ8CDR2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rsph6aQ8CDR2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Gm44771-201ENSMUST00000206975 626 ntBASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rsph6aQ8CDR2 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rsph6aQ8CDR2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Rsph6aQ8CDR2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.51■■□□□ 1.03
Rsph6aQ8CDR2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm11452-201ENSMUST00000122376 690 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44357-201ENSMUST00000195897 142 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm19658-201ENSMUST00000196231 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44367-201ENSMUST00000196836 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44350-201ENSMUST00000197197 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44390-201ENSMUST00000197533 144 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44313-201ENSMUST00000198018 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44486-201ENSMUST00000198508 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44314-201ENSMUST00000199263 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44394-201ENSMUST00000199558 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44484-201ENSMUST00000199873 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44466-201ENSMUST00000200264 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gm44359-201ENSMUST00000200671 138 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms