Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Ank2-226ENSMUST00000189368 339 ntBASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Alx1Q8C8B0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Alx1Q8C8B0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alx1Q8C8B0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alx1Q8C8B0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.3■□□□□ 0.68
Alx1Q8C8B0 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Gm13312-201ENSMUST00000119631 718 ntBASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms