Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Samd3Q8C4H2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.11■□□□□ 0.33
Samd3Q8C4H2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.11■□□□□ 0.33
Samd3Q8C4H2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Gm12895-201ENSMUST00000122214 226 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samd3Q8C4H2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samd3Q8C4H2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Samd3Q8C4H2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samd3Q8C4H2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms