Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm44430-201ENSMUST00000203376 995 ntBASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gm15372-201ENSMUST00000120729 834 ntBASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf2Q8BZT2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf2Q8BZT2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf2Q8BZT2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf2Q8BZT2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Gm28659-201ENSMUST00000188013 759 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms