Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh20Q8BIZ0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh20Q8BIZ0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh20Q8BIZ0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gm24841-201ENSMUST00000158676 357 ntBASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdh20Q8BIZ0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms