Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc40Q8BI79 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Gm7791-201ENSMUST00000219066 539 ntBASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc40Q8BI79 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Gm27463-201ENSMUST00000183569 57 ntBASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc40Q8BI79 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc40Q8BI79 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc40Q8BI79 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc40Q8BI79 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc40Q8BI79 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc40Q8BI79 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms