Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Gm7889-201ENSMUST00000185591 958 ntBASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.46■□□□□ 0.71
Samm50Q8BGH2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samm50Q8BGH2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Gm37025-201ENSMUST00000195159 829 ntBASIC19.44■□□□□ 0.7
Samm50Q8BGH2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samm50Q8BGH2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Samm50Q8BGH2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms