Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubp1Q811S7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.35■□□□□ 0.21
Ubp1Q811S7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubp1Q811S7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.34■□□□□ 0.21
Ubp1Q811S7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubp1Q811S7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubp1Q811S7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ubp1Q811S7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Ubp1Q811S7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubp1Q811S7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ubp1Q811S7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubp1Q811S7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.32■□□□□ 0.2
Ubp1Q811S7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.32■□□□□ 0.2
Ubp1Q811S7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.32■□□□□ 0.2
Ubp1Q811S7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubp1Q811S7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms