Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vrk1Q80X41 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vrk1Q80X41 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gm43514-201ENSMUST00000198852 424 ntBASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gm6443-201ENSMUST00000203599 874 ntBASIC15.78■□□□□ 0.12
Vrk1Q80X41 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.78■□□□□ 0.12
Vrk1Q80X41 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.78■□□□□ 0.12
Vrk1Q80X41 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vrk1Q80X41 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Gm10052-201ENSMUST00000168019 960 ntBASIC15.77■□□□□ 0.12
Vrk1Q80X41 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Gm7729-201ENSMUST00000050143 801 ntBASIC15.77■□□□□ 0.12
Vrk1Q80X41 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vrk1Q80X41 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vrk1Q80X41 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vrk1Q80X41 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Vrk1Q80X41 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vrk1Q80X41 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.76■□□□□ 0.11
Vrk1Q80X41 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Gm11452-201ENSMUST00000122376 690 ntBASIC15.76■□□□□ 0.11
Vrk1Q80X41 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.76■□□□□ 0.11
Vrk1Q80X41 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms