Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ush1gQ80T11 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Gm15372-201ENSMUST00000120729 834 ntBASIC18.09■□□□□ 0.49
Ush1gQ80T11 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.09■□□□□ 0.49
Ush1gQ80T11 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.09■□□□□ 0.49
Ush1gQ80T11 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ush1gQ80T11 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ush1gQ80T11 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ush1gQ80T11 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.08■□□□□ 0.49
Ush1gQ80T11 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ush1gQ80T11 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ush1gQ80T11 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.08■□□□□ 0.48
Ush1gQ80T11 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ush1gQ80T11 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ush1gQ80T11 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ush1gQ80T11 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ush1gQ80T11 Phf7-203ENSMUST00000226565 1971 ntBASIC18.08■□□□□ 0.48
Ush1gQ80T11 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.07■□□□□ 0.48
Ush1gQ80T11 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.07■□□□□ 0.48
Ush1gQ80T11 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Gm13186-201ENSMUST00000118031 316 ntBASIC18.06■□□□□ 0.48
Ush1gQ80T11 Gm11452-201ENSMUST00000122376 690 ntBASIC18.06■□□□□ 0.48
Ush1gQ80T11 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms