Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm1401-201ENSMUST00000122048 772 ntBASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm11452-201ENSMUST00000122376 690 ntBASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prpf38bQ80SY5 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Gm24841-201ENSMUST00000158676 357 ntBASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf38bQ80SY5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38bQ80SY5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38bQ80SY5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.27■□□□□ 0.35
Prpf38bQ80SY5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf38bQ80SY5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Gm37722-201ENSMUST00000193757 208 ntBASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf38bQ80SY5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms