Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gm13036-201ENSMUST00000117799 748 ntBASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gm9727-201ENSMUST00000161387 555 ntBASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx55Q6ZPL9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ddx55Q6ZPL9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx55Q6ZPL9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ddx55Q6ZPL9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx55Q6ZPL9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ddx55Q6ZPL9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx55Q6ZPL9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Ddx55Q6ZPL9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx55Q6ZPL9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Gm24513-201ENSMUST00000174964 138 ntBASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms