Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NfrkbQ6PIJ4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NfrkbQ6PIJ4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NfrkbQ6PIJ4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NfrkbQ6PIJ4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.64■□□□□ 0.58
NfrkbQ6PIJ4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfrkbQ6PIJ4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Gm10052-201ENSMUST00000168019 960 ntBASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Gm18421-201ENSMUST00000204122 625 ntBASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Gm7729-201ENSMUST00000050143 801 ntBASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfrkbQ6PIJ4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms