Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CtifQ6PEE2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CtifQ6PEE2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.73■□□□□ 0.43
CtifQ6PEE2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.73■□□□□ 0.43
CtifQ6PEE2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CtifQ6PEE2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.72■□□□□ 0.43
CtifQ6PEE2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CtifQ6PEE2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.71■□□□□ 0.43
CtifQ6PEE2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.71■□□□□ 0.43
CtifQ6PEE2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CtifQ6PEE2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
CtifQ6PEE2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.7■□□□□ 0.42
CtifQ6PEE2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CtifQ6PEE2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms