Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd3Q6P9Z1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Gm27011-201ENSMUST00000182352 972 ntBASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd3Q6P9Z1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smarcd3Q6P9Z1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcd3Q6P9Z1 Gm9731-201ENSMUST00000209480 747 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms