Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.58■□□□□ 0.56
Abcf1Q6P542 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Mir5122-201ENSMUST00000175004 89 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 Gm37055-201ENSMUST00000191866 133 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.57■□□□□ 0.56
Abcf1Q6P542 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcf1Q6P542 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.56■□□□□ 0.56
Abcf1Q6P542 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Abcf1Q6P542 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Timm23-208ENSMUST00000226683 750 ntBASIC18.55■□□□□ 0.56
Abcf1Q6P542 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcf1Q6P542 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Gm10517-202ENSMUST00000192970 758 ntBASIC18.54■□□□□ 0.56
Abcf1Q6P542 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms