Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Cep290Q6A078 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cep290Q6A078 Gm44335-201ENSMUST00000196879 141 ntBASIC16.93■□□□□ 0.3
Cep290Q6A078 Gm44297-201ENSMUST00000198304 141 ntBASIC16.93■□□□□ 0.3
Cep290Q6A078 Gm44346-201ENSMUST00000198851 141 ntBASIC16.93■□□□□ 0.3
Cep290Q6A078 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cep290Q6A078 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.93■□□□□ 0.3
Cep290Q6A078 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.92■□□□□ 0.3
Cep290Q6A078 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cep290Q6A078 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cep290Q6A078 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm5682-201ENSMUST00000173402 505 ntBASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.91■□□□□ 0.3
Cep290Q6A078 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.91■□□□□ 0.3
Cep290Q6A078 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm8655-201ENSMUST00000221159 852 ntBASIC16.91■□□□□ 0.3
Cep290Q6A078 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cep290Q6A078 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cep290Q6A078 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.91■□□□□ 0.3
Cep290Q6A078 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Cep290Q6A078 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cep290Q6A078 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cep290Q6A078 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
Cep290Q6A078 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Gm9172-201ENSMUST00000212092 954 ntBASIC16.9■□□□□ 0.3
Cep290Q6A078 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.9■□□□□ 0.3
Cep290Q6A078 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Gm4459-201ENSMUST00000118750 468 ntBASIC16.9■□□□□ 0.3
Cep290Q6A078 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.9■□□□□ 0.3
Cep290Q6A078 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.9■□□□□ 0.3
Cep290Q6A078 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cep290Q6A078 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cep290Q6A078 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cep290Q6A078 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.89■□□□□ 0.29
Cep290Q6A078 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cep290Q6A078 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms