Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.59■□□□□ 0.73
Ltn1Q6A009 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.59■□□□□ 0.73
Ltn1Q6A009 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.59■□□□□ 0.73
Ltn1Q6A009 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.58■□□□□ 0.73
Ltn1Q6A009 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ltn1Q6A009 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ltn1Q6A009 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ltn1Q6A009 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.58■□□□□ 0.73
Ltn1Q6A009 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ltn1Q6A009 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ltn1Q6A009 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ltn1Q6A009 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ltn1Q6A009 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ltn1Q6A009 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Gm5682-201ENSMUST00000173402 505 ntBASIC19.57■□□□□ 0.72
Ltn1Q6A009 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ltn1Q6A009 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.57■□□□□ 0.72
Ltn1Q6A009 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ltn1Q6A009 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.56■□□□□ 0.72
Ltn1Q6A009 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Gm2756-201ENSMUST00000195851 400 ntBASIC19.56■□□□□ 0.72
Ltn1Q6A009 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ltn1Q6A009 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.56■□□□□ 0.72
Ltn1Q6A009 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ltn1Q6A009 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Gm24513-201ENSMUST00000174964 138 ntBASIC19.55■□□□□ 0.72
Ltn1Q6A009 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.55■□□□□ 0.72
Ltn1Q6A009 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.55■□□□□ 0.72
Ltn1Q6A009 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.55■□□□□ 0.72
Ltn1Q6A009 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ltn1Q6A009 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ltn1Q6A009 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ltn1Q6A009 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ltn1Q6A009 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ltn1Q6A009 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ltn1Q6A009 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.54■□□□□ 0.72
Ltn1Q6A009 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.54■□□□□ 0.72
Ltn1Q6A009 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms