Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scube3Q66PY1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Gm27741-201ENSMUST00000185060 237 ntBASIC17.4■□□□□ 0.38
Scube3Q66PY1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scube3Q66PY1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scube3Q66PY1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scube3Q66PY1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scube3Q66PY1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.39■□□□□ 0.37
Scube3Q66PY1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Gm11950-201ENSMUST00000121615 838 ntBASIC17.39■□□□□ 0.37
Scube3Q66PY1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Gm33142-201ENSMUST00000193913 867 ntBASIC17.39■□□□□ 0.37
Scube3Q66PY1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.39■□□□□ 0.37
Scube3Q66PY1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scube3Q66PY1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.38■□□□□ 0.37
Scube3Q66PY1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.38■□□□□ 0.37
Scube3Q66PY1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scube3Q66PY1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube3Q66PY1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms