Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vamp1Q62442 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vamp1Q62442 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Gm42778-201ENSMUST00000199644 553 ntBASIC14.25□□□□□ -0.13
Vamp1Q62442 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vamp1Q62442 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vamp1Q62442 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vamp1Q62442 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vamp1Q62442 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.23□□□□□ -0.13
Vamp1Q62442 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.23□□□□□ -0.13
Vamp1Q62442 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.23□□□□□ -0.13
Vamp1Q62442 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vamp1Q62442 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms