Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
Six1Q62231 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six1Q62231 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six1Q62231 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six1Q62231 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
Six1Q62231 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Six1Q62231 Gm16011-201ENSMUST00000121567 2662 ntBASIC17■□□□□ 0.31
Six1Q62231 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17■□□□□ 0.31
Six1Q62231 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Six1Q62231 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Six1Q62231 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.99■□□□□ 0.31
Six1Q62231 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.99■□□□□ 0.31
Six1Q62231 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.99■□□□□ 0.31
Six1Q62231 Gm8520-201ENSMUST00000186517 868 ntBASIC16.99■□□□□ 0.31
Six1Q62231 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Six1Q62231 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.99■□□□□ 0.31
Six1Q62231 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six1Q62231 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.98■□□□□ 0.31
Six1Q62231 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.98■□□□□ 0.31
Six1Q62231 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Six1Q62231 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Gm11539-201ENSMUST00000119837 557 ntBASIC16.98■□□□□ 0.31
Six1Q62231 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Six1Q62231 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.98■□□□□ 0.31
Six1Q62231 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.98■□□□□ 0.31
Six1Q62231 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six1Q62231 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
Six1Q62231 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Six1Q62231 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.97■□□□□ 0.31
Six1Q62231 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.97■□□□□ 0.31
Six1Q62231 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Six1Q62231 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.97■□□□□ 0.31
Six1Q62231 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Gm18115-201ENSMUST00000221209 621 ntBASIC16.97■□□□□ 0.31
Six1Q62231 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Six1Q62231 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six1Q62231 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six1Q62231 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms